BEAST is built on a large body of prior work and appropriate citations for individual modules, models and components will be listed when BEAST is run. BEAST-Users mailing list. Users …

Installing BEAST. Unzip the downloaded compressed ZIP archive (currently BEAST.v10.5.0.zip). The unzipped files contain executable binaries for BEAST, BEAUti, LogCombiner, …

Installing BEAST BEAST has been developed in Java , which allows the same code to run on any platform that has the Java software installed. We have also created packages for each of the …

FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures.

An introductory tutorial to getting started with BEAST. This tutorial describes the use of BEAUti and BEAST to analyse some primate sequences and estimate a phylogenetic tree. It will take …

BEAST can be downloaded from the following link: BEAST X v10.5.0 - UNIX/Linux version 46.2MB; This will download a compressed tar archive (a ‘.tgz’ file).

Using BEAGLE with BEAST BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics package. It …

We have renamed the release that would have been called BEAST v1.10.5 as BEAST X v10.5.0. This is to distinguish it from the independent project called BEAST 2 – see: …

The first step will be to convert an alignment file in fasta format into a BEAST XML input file. This is done using the program BEAUti (this stands for Bayesian Evolutionary Analysis Utility). This …

To inform BEAUti/BEAST about the sampling dates of the sequences, go to the Tips menu and select the “Use tip dates” option. By default all the taxa are assumed to have a date of zero …